plotHeatmap-methods: Plots a heatmap of a matrix

Description Usage Arguments Value Examples

Description

Plots a heatmap with row and/or col clustering if specifief.

Usage

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plotHeatmap(x, row.cluster = TRUE, col.cluster = FALSE, scale = FALSE)

## S4 method for signature 'matrix'
plotHeatmap(x, row.cluster = TRUE, col.cluster = FALSE,
  scale = FALSE)

## S4 method for signature 'ExpressionSet'
plotHeatmap(x, row.cluster = TRUE,
  col.cluster = FALSE, scale = FALSE)

## S4 method for signature 'EList'
plotHeatmap(x, row.cluster = TRUE, col.cluster = FALSE,
  scale = FALSE)

## S4 method for signature 'DGEList'
plotHeatmap(x, row.cluster = TRUE, col.cluster = FALSE,
  scale = FALSE)

Arguments

x

object to plot.

row.cluster

logical specifying whether to apply hierarchichal clustering to the rows.

col.cluster

logical specifying whether to apply hierarchichal clustering to the columns.

scale

logical specifying whether to scale the rows.

Value

This function returns no value but has the side effect of producing a plot.

Examples

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ddiez/q3tools documentation built on May 15, 2019, 1:52 a.m.