dirmeier/knockout: Statistical Analysis of High-Throughput Genetic Perturbation Screens
Version 0.99.4

perturbatr does statistical analysis of large-scale genetic perturbation screens. The package provides various tools for normalisation, plotting and analysis of screens from single perturbation experiments as well as models for the joint analysis of multiple experiments. For the latter case we employ a random intercepts model to capture the variance that the different experiments exhibit.

Getting started

Package details

Bioconductor views CellBasedAssays Network Normalization Preprocessing Regression
MaintainerSimon Dirmeier <[email protected]>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
dirmeier/knockout documentation built on Feb. 13, 2018, 9:17 p.m.