perturbatr does statistical analysis of large-scale genetic perturbation screens. The package provides various tools for normalisation, plotting and analysis of screens from single perturbation experiments as well as models for the joint analysis of multiple experiments. For the latter case we employ a random intercepts model to capture the variance that the different experiments exhibit.
|Bioconductor views||CellBasedAssays Network Normalization Preprocessing Regression|
|Maintainer||Simon Dirmeier <[email protected]>|
|Package repository||View on GitHub|
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