run_different_perturbations_noisy: Run the simulations and add noise to the data

Description Usage Arguments Value See Also

Description

Run the simulations and add noise to the data

Usage

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run_different_perturbations_noisy(dose_pars, pars0, alpha_pars, alphas,
  perturbations, xs, p_log, p_pert, g, cores, alpha_par_settings,
  errorpars, N = 100)

Arguments

dose_pars

dosages eg setNames(1:10, "x1")

pars0

the "default" pars for the model

alpha_pars

The default alpha parameters e.g. c(a_tox_Cxy = log(.Machine$double.eps))

alphas

vector of values for the free pars a to compare r_0 against r_a

perturbations

list of sets of perturbations eg list(c(x1 = log(0.9), y1 = log(0.9)))

xs

xs

p_log

p_log

p_pert

p_pert

g

g

cores

detectFreeCores()

alpha_par_settings

named list. Entries are vectors of the names of aplha_pars you want to use for the algorithm e.g. list(upstream = c("a_tox_Cxy", "a_toy_Cyz"))

errorpars

list of vectors with absolute and relative errors: list(setting1 = c(sabs = 0, srel = 0.1))

N

number of realizations for each setting

Value

tibble

See Also

[run_different_perturbations()]


dlill/MRAr documentation built on May 16, 2019, 7:24 a.m.