Man pages for dth2/EpiModelHIV_SHAMP
Epidemic Modeling of HIV Transmission among MSM, MSMF and Heterosexual Populations

acts_shampSexual Acts Module for up to 5 race groups and 2 sexes.
agingAging Module
aging_hetAging Module
aging_msmAging Module
apportion_lrApportion Least-Remainder Method
assign_degreeAssign Degree Vertex Attribute on Network Objects
base_nw_msmConstruct Base Network for Model Estimation and Simulation
births_shamp2Births Module for up to 5 race groups heterosexuals and MSM...
calc_nwstats_msmCalculate Target Statistics for Network Model Estimation
cd4_hetCD4 Progression Module
condoms_shampCondom Use Module for 5 race groups and het/msm.
control_shampEpidemic Model Control Settings
deaths_shampDeath Module for up to 5 race groups heterosexuals and MSM.
demogupdate_shampDemography Check Module
disclose_shampDisclosure Module for up to 5 race groups and heterosexuals...
edges_correct_msmAdjustment for the Edges Coefficient with Changing Network...
EpiModelHIV-packageHIV Transmission Dynamics among MSM and Heterosexuals
estFitted Network Models for 10000 Person Network
get_argsGet Arguments from EpiModel Parameterization Functions
heatbath_msmf_shampTransmission Module for Heat Bath Exposure of MSMF to an MSM...
immigration_shampTransmission Module for those immigrating out of the country...
init_ccr5_msmSets the CCR5 genetic status of persons
init_ccr5_shampSets the CCR5 genetic status of persons
InitErgmTerm.absdiffbyDefinition for absdiffby ERGM Term
InitErgmTerm.absdiffnodemixDefinition for absdiffnodemix ERGM Term
initialize_hetInitialization Module
initialize_msmInitialization Module
initialize_shampInitialization Module for up to 5 race groups heterosexuals...
init_shampEpidemic Model Initial Conditions for SHAMP
init_status_msmInitialize the HIV status of persons in the network
init_status_shampInitialize the HIV status of persons in the network
input_shampImport and Check Data
ltGhanaLife Table for Ghana
make_nw_hetCalculate Network Statistics
param_shampEpidemic Model Parameters for SHAMP
position_shampPosition Module for msm and heterosexual contacts.
prep_shampPrEP Module for up to 5 race groups heterosexuals and MSM.
prevalence_shampPrevalence Calculations within Time Steps for up to 5 race...
progress_msmDisease Progression Module
reallocate_pcpProportionally Reallocate PrEP Adherence Class Probability
reinit_hetReinitialization Module
reinit_msmRe-Initialization Module
reinit_shampRe-Initialization Module
remove_bad_roles_msmRemoves any sexual partnerships prohibited by sexual role...
riskhist_shampRisk History Module
simnet_shampNetwork Resimulation Module
size.testSize test for memory allocation.
sourceDirSource All Files in a Directory
stNetwork Statistics Network Models for 10000 Person Network
test_shampHIV Testing Module for up to 5 race groups heterosexuals and...
trans_shampTransmission Module for AI and VI
truncate_simTruncate Simulation Time Series
tx_shampTreatment Module for up to 5 race groups heterosexuals and...
update_aiclass_msmUpdate Role Class in One-Off Partnerships
update_roleclass_msmUpdate Role Class in Main and Casual Partnerships
verbose_hetVerbose Module
verbose_msmVerbose Module
vl_shampViral Load Module
dth2/EpiModelHIV_SHAMP documentation built on Sept. 19, 2017, 8:57 p.m.