Files in dth2/EpiModelHIV_SHAMP
Epidemic Modeling of HIV Transmission among MSM, MSMF and Heterosexual Populations

.Rbuildignore
.gitignore
.travis.yml
01.setup_ego.R 01.setup_ego_JKB.R
DESCRIPTION
Model fit testing.R
NAMESPACE
R/EpiModelHIV-package.R R/ErgmTerms.R R/RcppExports.R R/data.R R/estimation.R R/input.data.shamp.R R/mod.acts.shamp.R R/mod.aging.R R/mod.births.shamp2.R R/mod.cd4.R R/mod.condoms.shamp.R R/mod.death.shamp.R R/mod.demog.shamp.R R/mod.disclose.shamp.R R/mod.immigration.R R/mod.initialize.R R/mod.initialize.shamp2.R R/mod.msmf.heatbath.R R/mod.position.shamp.R R/mod.prep.shamp.R R/mod.prevalence.shamp.R R/mod.progress.R R/mod.riskhist.shamp.R R/mod.simnet.shamp.R R/mod.test.shamp.R R/mod.trans_shamp.R R/mod.tx.shamp.R R/mod.update.aiclass.R R/mod.update.roleclass.R R/mod.verbose.R R/mod.vl.shamp.R R/params.shamp.R R/print.R R/size.test.R R/utilities.R README.md
data/ego.obj_c.rda
data/ego.obj_i.rda
data/ego.obj_p.rda
ego/setup.R inst/het-test-script.R inst/netsim.mods.R man/EpiModelHIV-package.Rd man/InitErgmTerm.absdiffby.Rd man/InitErgmTerm.absdiffnodemix.Rd man/acts_shamp.Rd man/aging.Rd man/aging_het.Rd man/aging_msm.Rd man/apportion_lr.Rd man/assign_degree.Rd man/base_nw_msm.Rd man/births_shamp2.Rd man/calc_nwstats_msm.Rd man/cd4_het.Rd man/condoms_shamp.Rd man/control_shamp.Rd man/deaths_shamp.Rd man/demogupdate_shamp.Rd man/disclose_shamp.Rd man/edges_correct_msm.Rd man/est.Rd man/get_args.Rd man/heatbath_msmf_shamp.Rd man/immigration_shamp.Rd man/init_ccr5_msm.Rd man/init_ccr5_shamp.Rd man/init_shamp.Rd man/init_status_msm.Rd man/init_status_shamp.Rd man/initialize_het.Rd man/initialize_msm.Rd man/initialize_shamp.Rd man/input_shamp.Rd man/ltGhana.Rd man/make_nw_het.Rd man/param_shamp.Rd man/position_shamp.Rd man/prep_shamp.Rd man/prevalence_shamp.Rd man/progress_msm.Rd man/reallocate_pcp.Rd man/reinit_het.Rd man/reinit_msm.Rd man/reinit_shamp.Rd man/remove_bad_roles_msm.Rd man/riskhist_shamp.Rd man/simnet_shamp.Rd man/size.test.Rd man/sourceDir.Rd man/st.Rd man/test_shamp.Rd man/trans_shamp.Rd man/truncate_sim.Rd man/tx_shamp.Rd man/update_aiclass_msm.Rd man/update_roleclass_msm.Rd man/verbose_het.Rd man/verbose_msm.Rd man/vl_shamp.Rd model_tests.R
src/RcppExports.cpp
src/changestats.users.c
src/changestats.users.h
src/include_stubs.c
src/mod.aging.cpp
tempR/EpiModelHIV-package.R tempR/ErgmTerms.R tempR/RcppExports.R tempR/data.R tempR/estimation.R tempR/mod.acts.R tempR/mod.acts.shamp.R tempR/mod.births.R tempR/mod.births.shamp.R tempR/mod.cd4.R tempR/mod.condoms.R tempR/mod.condoms.shamp2.R tempR/mod.death.R tempR/mod.death.shamp.R tempR/mod.disclose.R tempR/mod.disclose.shamp.R tempR/mod.initialize.R tempR/mod.initialize.shamp2.R tempR/mod.msmf.heatbath.R tempR/mod.position.R tempR/mod.position.shamp.R tempR/mod.prep.R tempR/mod.prep.shamp.R tempR/mod.prevalence.R tempR/mod.prevalence.shamp.R tempR/mod.progress.R tempR/mod.riskhist.R tempR/mod.riskhist.shamp.R tempR/mod.simnet.R tempR/mod.simnet.shamp.R tempR/mod.test.R tempR/mod.test.shamp.R tempR/mod.trans.R tempR/mod.tx.R tempR/mod.tx.shamp.R tempR/mod.update.aiclass.R tempR/mod.update.roleclass.R tempR/mod.verbose.R tempR/mod.vl.R tempR/mod.vl.shamp.R tempR/params.R tempR/params.shamp.R tempR/print.R tempR/utilities.R
test
tests/Test_acts_max_acts.R tests/Test_acts_min_W_acts.R tests/Test_baseline.R tests/Test_baseline.Rmd
tests/Test_baseline.html
tests/Test_births.R tests/Test_death.R tests/Test_demog.R tests/Test_immig_max_infections.R tests/Test_immig_max_infections_stayaway.R tests/Test_immig_notrans_infections_stayaway.R tests/Test_msmheatbath_max_infection_nomsmf.R tests/Test_msmheatbath_max_infections.R tests/Test_template.R tests/Test_testing.R tests/Test_testing_alwaystest.R tests/Test_testing_nevertest.R tests/Test_testing_test_daily_alltest.R tests/Test_testing_test_frequently_alltest_immig_out.R tests/Test_treatment_all_FS.R tests/Test_treatment_noinitprob_all_FS.R tests/age_mort.R tests/testthat.R tests/testthat/test-estimation.R tests/testthat/test-netsim.R tests/testthat/test-params.R
dth2/EpiModelHIV_SHAMP documentation built on Sept. 19, 2017, 8:57 p.m.