Files in ec363/fpcountr
Fluorescent Protein Calibration For Plate Readers

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/calc_fpconc.R R/calc_fppercell.R R/calibrate_flu.R R/calibrate_od.R R/correct_flu.R R/data.R R/flu_norm.R R/generate_cfs.R R/get_conc_A280.R R/get_conc_ECmax.R R/get_conc_bca.R R/get_extcoeff_A280.R R/get_fpbase_properties.R R/get_kfactor.R R/get_mw.R R/get_pathlength.R R/od_norm.R R/parse_magellan.R R/parse_magellan_spectrum.R R/plate_format_functions.R R/process_absorbance_spectrum.R R/process_plate.R R/save_metadata_template.R

R/sysdata.rda

R/view_kfactors.R README.md

_pkgdown.yml

data/aa_mass_data.rda

data/cell_quench_data.rda

data/fpbase_data.rda

data/kfactors_buffers_data.rda

data/kfactors_temperature_data.rda

data/pathlength_water_data.rda

data/protein_seq_data.rda

docs/404.html

docs/LICENSE-text.html

docs/LICENSE.html

docs/apple-touch-icon.png

docs/articles/data_parsing.html

docs/articles/fpcountr.html

docs/articles/fpcountr_files/figure-html/unnamed-chunk-43-1.png

docs/articles/fpcountr_files/figure-html/unnamed-chunk-43-2.png

docs/articles/index.html

docs/articles/path_lengths.html

docs/articles/path_lengths_files/figure-html/unnamed-chunk-5-1.png

docs/authors.html

docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js

docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js.map

docs/deps/bootstrap-5.3.1/bootstrap.min.css

docs/deps/data-deps.txt

docs/deps/jquery-3.6.0/jquery-3.6.0.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.map

docs/favicon-48x48.png

docs/favicon.ico

docs/favicon.svg

docs/index.html

docs/link.svg

docs/logo.png

docs/news/index.html

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Rplot001.png

docs/reference/aa_mass_data.html

docs/reference/calc_fpconc.html

docs/reference/calc_fppercell.html

docs/reference/calibrate_flu.html

docs/reference/calibrate_od.html

docs/reference/cell_quench_data.html

docs/reference/correct_flu.html

docs/reference/figures/calc_fpconc_calibrated_mTagBFP2_concentration.png

docs/reference/figures/calc_fppercell_calibratedmTagBFP2_perCell.png

docs/reference/figures/gen_cfs_fluorescence_data_parsed_cfs_flu3.png

docs/reference/figures/gen_cfs_fluorescence_data_parsed_cfs_flu4.png

docs/reference/figures/get_conc_plot3a_abs_spectra_geomsmooth.png

docs/reference/figures/get_conc_plot6b_ecmax_models_all_logplot.png

docs/reference/figures/getconc_plot3a_abs_spectra_geomsmooth.png

docs/reference/figures/getconc_plot6b_ecmax_models_all_logplot.png

docs/reference/figures/gh_overview.png

docs/reference/figures/logo.png

docs/reference/figures/mTagBFP2_molar.png

docs/reference/figures/mTagBFP2_percell.png

docs/reference/figures/plot_abs_plot3_normcm1.png

docs/reference/figures/process_20210501_mTagBFP2_ecoli_response_data_parsed_mTagBFP2.png

docs/reference/figures/process_20210501_mTagBFP2_ecoli_response_data_parsed_mTagBFP2calib.png

docs/reference/figures/process_20210501_mTagBFP2_ecoli_response_data_parsed_mTagBFP2corrected.png

docs/reference/figures/processabs_plot3_normcm1.png

docs/reference/figures/vignetteparsing_metadata.png

docs/reference/figures/vignetteparsing_parsed.png

docs/reference/figures/vignetteparsing_rawdata.png

docs/reference/find_columns.html

docs/reference/find_plate_format.html

docs/reference/find_rows.html

docs/reference/find_wells.html

docs/reference/find_wells_in_column.html

docs/reference/find_wells_in_row.html

docs/reference/find_wells_in_rowcolumn.html

docs/reference/flu_norm.html

docs/reference/fpbase_data.html

docs/reference/generate_cfs.html

docs/reference/get_conc_A280.html

docs/reference/get_conc_ECmax.html

docs/reference/get_conc_bca.html

docs/reference/get_extcoeff_A280.html

docs/reference/get_fpbase_properties.html

docs/reference/get_kfactor.html

docs/reference/get_mw.html

docs/reference/get_pathlength.html

docs/reference/get_properties.html

docs/reference/index.html

docs/reference/kfactors_buffers_data.html

docs/reference/kfactors_temperature_data.html

docs/reference/magellan_parse.html

docs/reference/magellan_spectrum_parse.html

docs/reference/od_norm.html

docs/reference/parse_magellan.html

docs/reference/parse_magellan_spectrum.html

docs/reference/pathlength_water_data.html

docs/reference/plot_absorbance_spectrum.html

docs/reference/process_absorbance_spectrum.html

docs/reference/process_plate.html

docs/reference/protein_seq_data.html

docs/reference/save_metadata_template.html

docs/reference/view_kfactors.html

docs/search.json

docs/site.webmanifest

docs/sitemap.xml

docs/web-app-manifest-192x192.png

docs/web-app-manifest-512x512.png

fpcountr.Rproj

inst/CITATION

inst/WORDLIST

inst/extdata/example_absorbance.csv

inst/extdata/example_absorbance_meta.csv

inst/extdata/example_experiment.csv

inst/extdata/example_experiment_meta.csv

inst/extdata/example_fluorescence.csv

inst/extdata/example_fluorescence_meta.csv

inst/extdata/od_conversion_factors.csv

inst/extdata/od_conversion_factors2.csv

man/aa_mass_data.Rd man/calc_fpconc.Rd man/calc_fppercell.Rd man/calibrate_flu.Rd man/calibrate_od.Rd man/cell_quench_data.Rd man/correct_flu.Rd

man/figures/calc_fpconc_calibrated_mTagBFP2_concentration.png

man/figures/calc_fppercell_calibratedmTagBFP2_perCell.png

man/figures/gen_cfs_fluorescence_data_parsed_cfs_flu3.png

man/figures/gen_cfs_fluorescence_data_parsed_cfs_flu4.png

man/figures/getconc_plot3a_abs_spectra_geomsmooth.png

man/figures/getconc_plot6b_ecmax_models_all_logplot.png

man/figures/gh_overview.png

man/figures/logo.png

man/figures/process_20210501_mTagBFP2_ecoli_response_data_parsed_mTagBFP2.png

man/figures/process_20210501_mTagBFP2_ecoli_response_data_parsed_mTagBFP2calib.png

man/figures/process_20210501_mTagBFP2_ecoli_response_data_parsed_mTagBFP2corrected.png

man/figures/processabs_plot3_normcm1.png

man/figures/vignetteparsing_metadata.png

man/figures/vignetteparsing_parsed.png

man/figures/vignetteparsing_rawdata.png

man/find_columns.Rd man/find_plate_format.Rd man/find_rows.Rd man/find_wells.Rd man/find_wells_in_column.Rd man/find_wells_in_row.Rd man/find_wells_in_rowcolumn.Rd man/flu_norm.Rd man/fpbase_data.Rd man/generate_cfs.Rd man/get_conc_A280.Rd man/get_conc_ECmax.Rd man/get_conc_bca.Rd man/get_extcoeff_A280.Rd man/get_fpbase_properties.Rd man/get_kfactor.Rd man/get_mw.Rd man/get_pathlength.Rd man/kfactors_buffers_data.Rd man/kfactors_temperature_data.Rd man/od_norm.Rd man/parse_magellan.Rd man/parse_magellan_spectrum.Rd man/pathlength_water_data.Rd man/process_absorbance_spectrum.Rd man/process_plate.Rd man/protein_seq_data.Rd man/save_metadata_template.Rd man/view_kfactors.Rd

pkgdown/favicon/apple-touch-icon.png

pkgdown/favicon/favicon-48x48.png

pkgdown/favicon/favicon.ico

pkgdown/favicon/favicon.svg

pkgdown/favicon/site.webmanifest

pkgdown/favicon/web-app-manifest-192x192.png

pkgdown/favicon/web-app-manifest-512x512.png

vignettes/.gitignore

vignettes/data/example_absorbance.csv

vignettes/data/example_absorbance_meta.csv

vignettes/data/example_absorbance_parsed.csv

vignettes/data/example_experiment.csv

vignettes/data/example_experiment_meta.csv

vignettes/data/example_experiment_parsed.csv

vignettes/data/example_fluorescence.csv

vignettes/data/example_fluorescence_meta.csv

vignettes/data/example_fluorescence_parsed.csv

vignettes/data/od_conversion_factors.csv

vignettes/data/od_conversion_factors2.csv

vignettes/data/vignetteintro_files.csv

vignettes/data/vignetteparsing_meta_absspectrum.csv

vignettes/data/vignetteparsing_meta_exptdata.csv

vignettes/data/vignetteparsing_meta_fluordata.csv

vignettes/data_parsing.Rmd vignettes/fpcountr.Rmd vignettes/path_lengths.Rmd

ec363/fpcountr documentation built on Nov. 29, 2024, 12:03 p.m.

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ec363/fpcountr
Fluorescent Protein Calibration For Plate Readers

Files in ec363/fpcountr
Fluorescent Protein Calibration For Plate Readers

R Package Documentation

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ec363/fpcountr Fluorescent Protein Calibration For Plate Readers

Files in ec363/fpcountr Fluorescent Protein Calibration For Plate Readers

R Package Documentation

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ec363/fpcountr
Fluorescent Protein Calibration For Plate Readers

Files in ec363/fpcountr
Fluorescent Protein Calibration For Plate Readers