CellScore_RidgePlot: Cell Score Ridge Plot

In eisascience/scCustFx: single-cell custom fxs Package

Cell Score Ridge Plot

Description

Plots a ridge plot of cell scores from a specific reduction

Usage

CellScore_RidgePlot(
  SerObj,
  reduction = "inmf",
  group.by = "orig.ident",
  compN = 1,
  plot = T,
  cols = NULL
)

Arguments

SerObj	A Seurat SerObj.
reduction	which reduction to use to get cell scores
plot	if true returns plot else returns SerObj with CellScore
cols	color vector passed to VlnPlot
raster	raster or not
pt.size	point size passed to featureplot

Details

General principles behind it:

Value

plot or SerObj

Examples

CellScore_RidgePlot(SerObj = ComboSerObj_Ser, compN = 2, reduction = "inmf",
plot = T,  group.by = "Species", cols = col_vector)

eisascience/scCustFx documentation built on June 2, 2025, 3:59 a.m.