compressSerHD5: compressSerHD5

In eisascience/scCustFx: single-cell custom fxs Package

compressSerHD5

Description

compressSerHD5 will save space on your drives.

Usage

compressSerHD5(
  SerObj = NULL,
  load.path = NULL,
  overwrite = F,
  save.path = NULL,
  updateSerObj = F,
  returnSerObj = F
)

Arguments

SerObj	A Seurat Object
load.path	the path to a seurat .rds file
overwrite	default F overwirtes the new hd5 if exists
save.path	the path to the desired hd5 seurat file. Default is NULL which then load.path is used to save the new object next to it.
updateSerObj	default F if T runs UpdateSerObj()
returnSerObj	default F if T returns the Seurat object to be used in a pipeline

Value

Saves HD5 Seurat object to path given

eisascience/scCustFx documentation built on June 2, 2025, 3:59 a.m.