dropsimNormV2: dropsimNormV2 speeds up using sparse matrix fx as much as...

View source: R/Normalizations.R

dropsimNormV2R Documentation

dropsimNormV2 speeds up using sparse matrix fx as much as possible

Description

calls normaliseDGEv2 instead of dropsim::normaliseDGE()

Usage

dropsimNormV2(
  GeneExprMat,
  featuresToUse,
  minLibrarySize = 0,
  maxLibrarySize = 10,
  center = FALSE,
  scale = TRUE,
  gene_subset = 1
)

Arguments

GeneExprMat

A matrix rows of genes and cols of cells

Value

A quantile-based normalized matrix


eisascience/scCustFx documentation built on June 2, 2025, 3:59 a.m.