sim_replicate: Simulate entire pipeline: importation, growth, sampling
In emvolz-phylodynamics/variantAnalysis: sarscov2 variant analysis
Description
Simulate entire pipeline: importation, growth, sampling
Usage
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sim_replicate(
E_imports0 = 650,
E_imports1 = 650,
mu = lubridate::decimal_date(as.Date("2021-04-18")),
sigma = 12.9/365,
tfin = lubridate::decimal_date(as.Date("2021-04-18")) + 1/12,
Rvariant = 1.5 * 1,
Rancestral = 0.9,
Rsd = 0.2,
rho0 = 0.9,
rho1 = 0.66,
seir_gen = NULL
)
emvolz-phylodynamics/variantAnalysis documentation built on Nov. 13, 2021, 7:16 p.m.
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Description
Simulate entire pipeline: importation, growth, sampling
Usage
1 2 3 4 5 6 7 8 9 10 11 12 13 | sim_replicate(
E_imports0 = 650,
E_imports1 = 650,
mu = lubridate::decimal_date(as.Date("2021-04-18")),
sigma = 12.9/365,
tfin = lubridate::decimal_date(as.Date("2021-04-18")) + 1/12,
Rvariant = 1.5 * 1,
Rancestral = 0.9,
Rsd = 0.2,
rho0 = 0.9,
rho1 = 0.66,
seir_gen = NULL
)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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