Files in epiforecasts/scoringutils
Utilities for Scoring and Assessing Predictions

.Rbuildignore
.Rinstignore
.devcontainer/Dockerfile
.devcontainer/devcontainer.json
.devcontainer/library-scripts/common-debian.sh
.github/.gitignore
.github/CONTRIBUTING.md .github/PULL_REQUEST_TEMPLATE.md
.github/dependabot.yml
.github/workflows/R-CMD-check.yaml
.github/workflows/build-image.yaml
.github/workflows/lint.yaml
.github/workflows/pkgdown.yaml
.github/workflows/render_readme.yaml
.github/workflows/test-coverage.yaml
.gitignore
.lintr
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md R/check-input-helpers.R R/class-forecast-binary.R R/class-forecast-nominal.R R/class-forecast-ordinal.R R/class-forecast-point.R R/class-forecast-quantile.R R/class-forecast-sample.R R/class-forecast.R R/class-scores.R R/documentation-templates.R R/forecast-unit.R R/get-correlations.R R/get-coverage.R R/get-duplicate-forecasts.R R/get-forecast-counts.R R/get-forecast-type.R R/get-pit-histogram.R R/get-protected-columns.R R/helper-quantile-interval-range.R R/metrics-binary.R R/metrics-interval-range.R R/metrics-nominal.R R/metrics-ordinal.R R/metrics-point.R R/metrics-quantile.R R/metrics-sample.R R/metrics.R R/pairwise-comparisons.R R/plot-heatmap.R R/plot-wis.R R/score.R R/scoringutils.R R/summarise_scores.R R/theme-scoringutils.R R/transform-forecasts.R R/z-globalVariables.R R/z-packageStartupMessage.R README.Rmd README.md
_pkgdown.yml
data/example_binary.rda
data/example_nominal.rda
data/example_ordinal.rda
data/example_point.rda
data/example_quantile.rda
data/example_sample_continuous.rda
data/example_sample_discrete.rda
inst/CITATION
inst/WORDLIST
inst/create-example-data.R
inst/manuscript/jss.bst
inst/manuscript/jss.cls
inst/manuscript/jsslogo.jpg
inst/manuscript/manuscript.Rmd inst/manuscript/manuscript.pdf
inst/manuscript/manuscript.tex
inst/manuscript/output/calibration-diagnostic-examples.png
inst/manuscript/output/calibration-diagnostic-examples.rds
inst/manuscript/output/sample-convergence.rds
inst/manuscript/references.bib
inst/manuscript/scoringutils-paper.bib
man/add_relative_skill.Rd man/ae_median_quantile.Rd man/ae_median_sample.Rd man/apply_metrics.Rd man/as_forecast_binary.Rd man/as_forecast_doc_template.Rd man/as_forecast_generic.Rd man/as_forecast_nominal.Rd man/as_forecast_ordinal.Rd man/as_forecast_point.Rd man/as_forecast_quantile.Rd man/as_forecast_sample.Rd man/as_scores.Rd man/assert_dims_ok_point.Rd man/assert_forecast.Rd man/assert_forecast_generic.Rd man/assert_forecast_type.Rd man/assert_input_binary.Rd man/assert_input_interval.Rd man/assert_input_nominal.Rd man/assert_input_ordinal.Rd man/assert_input_point.Rd man/assert_input_quantile.Rd man/assert_input_sample.Rd man/assert_scores.Rd man/bias_quantile.Rd man/bias_quantile_single_vector.Rd man/bias_sample.Rd man/check_columns_present.Rd man/check_dims_ok_point.Rd man/check_duplicates.Rd man/check_input_binary.Rd man/check_input_interval.Rd man/check_input_point.Rd man/check_input_quantile.Rd man/check_input_sample.Rd man/check_number_per_forecast.Rd man/check_numeric_vector.Rd man/check_try.Rd man/clean_forecast.Rd man/compare_forecasts.Rd man/crps_sample.Rd man/document_assert_functions.Rd man/document_check_functions.Rd man/document_test_functions.Rd man/dss_sample.Rd man/ensure_data.table.Rd man/example_binary.Rd man/example_nominal.Rd man/example_ordinal.Rd man/example_point.Rd man/example_quantile.Rd man/example_sample_continuous.Rd man/example_sample_discrete.Rd
man/figures/input-formats-scoring-rules.png
man/figures/lifecycle-archived.svg
man/figures/lifecycle-defunct.svg
man/figures/lifecycle-deprecated.svg
man/figures/lifecycle-experimental.svg
man/figures/lifecycle-maturing.svg
man/figures/lifecycle-questioning.svg
man/figures/lifecycle-stable.svg
man/figures/lifecycle-superseded.svg
man/figures/metrics-binary-point.png
man/figures/metrics-nominal.png
man/figures/metrics-ordinal.png
man/figures/metrics-quantile.png
man/figures/metrics-sample.png
man/figures/pairwise-illustration.png
man/figures/required-inputs.png
man/figures/workflow.png
man/forecast_types.Rd man/geometric_mean.Rd man/get_correlations.Rd man/get_coverage.Rd man/get_duplicate_forecasts.Rd man/get_forecast_counts.Rd man/get_forecast_type.Rd man/get_forecast_unit.Rd man/get_metrics.Rd man/get_metrics.forecast_binary.Rd man/get_metrics.forecast_nominal.Rd man/get_metrics.forecast_ordinal.Rd man/get_metrics.forecast_point.Rd man/get_metrics.forecast_quantile.Rd man/get_metrics.forecast_sample.Rd man/get_metrics.scores.Rd man/get_pairwise_comparisons.Rd man/get_pit_histogram.Rd man/get_protected_columns.Rd man/get_range_from_quantile.Rd man/get_type.Rd man/illustration-input-metric-binary-point.Rd man/illustration-input-metric-nominal.Rd man/illustration-input-metric-ordinal.Rd man/illustration-input-metric-quantile.Rd man/illustration-input-metric-sample.Rd man/interpolate_median.Rd man/interval_coverage.Rd man/interval_score.Rd man/is_forecast.Rd man/log_shift.Rd man/logs_sample.Rd man/mad_sample.Rd man/new_forecast.Rd man/new_scores.Rd man/pairwise_comparison_one_group.Rd man/permutation_test.Rd man/pit_histogram_sample.Rd man/plot_correlations.Rd man/plot_forecast_counts.Rd man/plot_heatmap.Rd man/plot_interval_coverage.Rd man/plot_pairwise_comparisons.Rd man/plot_quantile_coverage.Rd man/plot_wis.Rd man/print.forecast.Rd man/quantile_score.Rd man/quantile_to_interval.Rd man/rps_ordinal.Rd man/run_safely.Rd man/sample_to_interval_long.Rd man/score.Rd man/scoring-functions-binary.Rd man/scoring-functions-nominal.Rd man/scoringutils-package.Rd man/se_mean_sample.Rd man/select_metrics.Rd man/set_forecast_unit.Rd man/summarise_scores.Rd man/test_columns_not_present.Rd man/test_columns_present.Rd man/theme_scoringutils.Rd man/transform_forecasts.Rd man/validate_metrics.Rd man/wis.Rd
scoringutils.Rproj
tests/testthat.R tests/testthat/_snaps/class-forecast.md
tests/testthat/_snaps/get-correlations/plot-correlation.svg
tests/testthat/_snaps/get-coverage/plot-interval-coverage.svg
tests/testthat/_snaps/get-coverage/plot-quantile-coverage.svg
tests/testthat/_snaps/get-forecast-counts/plot-available-forecasts.svg
tests/testthat/_snaps/helper-quantile-interval-range.md
tests/testthat/_snaps/pairwise_comparison/plot-pairwise-comparison-pval.svg
tests/testthat/_snaps/pairwise_comparison/plot-pairwise-comparison.svg
tests/testthat/_snaps/plot_heatmap/plot-heatmap.svg
tests/testthat/_snaps/plot_wis/plot-wis-flip.svg
tests/testthat/_snaps/plot_wis/plot-wis-no-relative.svg
tests/testthat/_snaps/plot_wis/plot-wis.svg
tests/testthat/setup.R tests/testthat/test-check-input-helpers.R tests/testthat/test-class-forecast-binary.R tests/testthat/test-class-forecast-nominal.R tests/testthat/test-class-forecast-ordinal.R tests/testthat/test-class-forecast-point.R tests/testthat/test-class-forecast-quantile.R tests/testthat/test-class-forecast-sample.R tests/testthat/test-class-forecast.R tests/testthat/test-class-scores.R tests/testthat/test-forecast-unit.R tests/testthat/test-get-correlations.R tests/testthat/test-get-coverage.R tests/testthat/test-get-duplicate-forecasts.R tests/testthat/test-get-forecast-counts.R tests/testthat/test-get-forecast-type.R tests/testthat/test-get-protected-columns.R tests/testthat/test-helper-quantile-interval-range.R tests/testthat/test-inputs-scoring-functions.R tests/testthat/test-metrics-binary.R tests/testthat/test-metrics-interval-range.R tests/testthat/test-metrics-nominal.R tests/testthat/test-metrics-ordinal.R tests/testthat/test-metrics-point.R tests/testthat/test-metrics-quantile.R tests/testthat/test-metrics-sample.R tests/testthat/test-metrics.R tests/testthat/test-pairwise_comparison.R tests/testthat/test-plot_heatmap.R tests/testthat/test-plot_wis.R tests/testthat/test-score.R tests/testthat/test-summarise_scores.R tests/testthat/test-transform-forecasts.R
vignettes/.gitignore
vignettes/Deprecated-functions.Rmd vignettes/Deprecated-visualisations.Rmd
vignettes/illustration-effect-scale.png
vignettes/score-convergence-outliers.png
vignettes/score-locality.png
vignettes/scoring-rules.Rmd
vignettes/scoring-rules/input-binary.png
vignettes/scoring-rules/input-point.png
vignettes/scoring-rules/input-quantile.png
vignettes/scoring-rules/input-sample.png
vignettes/scoring-rules/scoringutils-package.bib
epiforecasts/scoringutils documentation built on Dec. 11, 2024, 11:12 a.m.