Man pages for eugeniaeueu/Onassis
OnASSIs Ontology Annotation and Semantic SImilarity software

annotate'annotate'
annotateDF'annotateDF'
annotateTissueDisease'annotateTissueDisease'
CaseMatch'CaseMatch'
CMdictionary'CMdictionary'
CMdictionary-classClass that stores a Conceptmapper dictionary
CMoptions'CMoptions'
CMoptions-classClass to set the options to run the EntityFinder
collapse'collapse'
compare'compare'
createScoreMatrix'createScoreMatrix'
dictInfoGet and Set the dicInfo slot for the 'CMdictionary' class
dictionary'dictionary<-'
dict_location'dict_location'
dictRef'dictRef'
dictTypes'dictTypes'
entities'entities<-'
EntityFinder'EntityFinder'
EntityFinder-classEntityFinder class to create a Conceptmapper instance
experiment_types'experiment_types'
filterconcepts'filterconcepts'
filterTerms'filterTerms'
FindAllMatchesMethod FindAllMatches
findEntitiesMethod findEntities
findHealthy'findHealthy'
GEOHandler-functions'connectToGEODB'
getGEOMetadata'getGEOMetadata'
groupConfig'groupConfig'
groupsimMethod groupsim
groupwiseConfigRef'groupwiseConfigRef'
icConfig'icConfig'
listCMOptions'listCMOptions'
listSimilarities'listSimilarities'
mergeonassis'mergeonassis'
multisim'multisim'
OnassisOnASSiS (Ontology Annotations and Semantic Similarity...
Onassis-classOnassis-class
ontology'ontology<-'
OrderIndependentLookup'OrderIndependentLookup'
organism_types'organism_types'
pairsim'pairsim'
pairwiseConfig'pairwiseConfig'
pairwiseConfigRef'pairwiseConfigRef'
paramValueIndexMethod paramValueIndex
samplesim'samplesim'
scores'scores<-'
SearchStrategyMethod SearchStrategy
semanticdifference'semanticdifference'
sim'sim'
simil'simil<-'
Similarity'Similarity'
Similarity-classSimilarity class to compute similarities between concepts in...
similarityInstance'similarityInstance'
StemmerMethod Stemmer
StopWordsMethod StopWords
SynonymTypeMethod SynonymType
typeSystemRefMethod typeSystemRef
eugeniaeueu/Onassis documentation built on July 13, 2018, 2:25 p.m.