EntityFinder-class: EntityFinder class to create a Conceptmapper instance

Description Details Slots Examples

Description

EntityFinder is a class that wraps a Conceptmapper pipeline using the CCP UIMA Type System https://github.com/UCDenver-ccp/ccp-nlp. The pipeline includes a sentence detector, offset tokenizer and retrieves concepts from dictionaries built from OBO/OWL formatted ontology files.

Details

The following methods can be applied to EntityFinder

findEntities
annotateDF
The methods can be automatically called using the function EntityFinder

Slots

typeSystemRef

The reference to the Java object representing the type system

Examples

1
finder <- new('EntityFinder')

eugeniaeueu/Onassis documentation built on March 9, 2020, 8:17 a.m.