create_blank_plate: Create a blank plate template as a tibble (with helper...

In ewallace/tidyqpcr: Quantitative PCR Analysis with the Tidyverse

Create a blank plate template as a tibble (with helper functions for common plate sizes)

Description

For more help, examples and explanations, see the plate setup vignette: vignette("platesetup_vignette", package = "tidyqpcr")

Usage

create_blank_plate(well_row = LETTERS[1:16], well_col = 1:24)

create_blank_plate_96well()

create_blank_plate_1536well(
  well_row = make_row_names_lc1536(),
  well_col = 1:48
)

Arguments

well_row	Vector of Row labels, usually LETTERS
well_col	Vector of Column labels, usually numbers

Value

tibble (data frame) with columns well_row, well_col, well. This contains all pairwise combinations of well_row and well_col, as well as individual well names. Both well_row and well_col are coerced to factors (even if well_col is supplied as numbers), to ensure order is consistent.

However, well is a character vector as that is the default behaviour of "unite", and display order doesn't matter.

Default value describes a full 384-well plate.

Functions

• create_blank_plate_96well(): create blank 96-well plate

• create_blank_plate_1536well(): create blank 1536-well plate

See Also

Other plate creation functions: create_colkey_4diln_2ctrl_in_24(), create_colkey_6_in_24(), create_colkey_6diln_2ctrl_in_24(), create_rowkey_4_in_16(), create_rowkey_8_in_16_plain(), display_plate(), display_plate_qpcr(), display_plate_value(), label_plate_rowcol(), make_row_names_echo1536(), make_row_names_lc1536()

Examples

create_blank_plate(well_row=LETTERS[1:2],well_col=1:3)

create_blank_plate_96well()

create_blank_plate_1536well()

# create blank 96-well plate with empty edge wells

create_blank_plate(well_row=LETTERS[2:7], well_col=2:11)

# create blank 1536-well plate with empty edge wells

full_plate_row_names <- make_row_names_lc1536()

create_blank_plate(well_row=full_plate_row_names[2:31], well_col=2:47)

ewallace/tidyqpcr documentation built on June 5, 2024, 10:04 a.m.