Embed: Embed the analysis object

In exaexa/DiffSOM: Comparative analysis using EmbedSOM

Description

This is the computationally intensive part. You may want to provide a clustering seed.

Usage

Embed(ds, importance = NULL, colsToUse = NULL, xdim = 16,
  ydim = 16, map = NULL, rlen = 10, distf = 2,
  nhbr.method = "manhattan", nclust = NULL, clustf = NULL,
  esmooth = NULL, ek = NULL, eadjust = NULL, emcoords = "flat",
  emcoords.pow = 1)

Examples

ds <- Embed(ds, colsToUse=c(1,4,7:14), nclust=5, importance=c(1,1,2,1,3,1,1,1,1,1))

exaexa/DiffSOM documentation built on Aug. 22, 2019, 2:46 p.m.