PlotExprs: Plot marker expressions for histogram-style comparison of...

Description Usage Arguments Examples

View source: R/diffsom.R

Description

Plot marker expressions for histogram-style comparison of multiple samples/clusters.

Usage

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PlotExprs(ds, cols = ds$colsUsed, names = NicePrettyColnames(ds$fs, sel
  = cols), files = F, clusters = F, ref = NULL, alpha = 0.1,
  rdist = function(n) {     0.1 * rnorm(n) }, ...)

Arguments

cols

Which columns to plot

names

Which names to use for the columns

files

T/F – plot separate histograms for files

clusters

T/F – plot separate histograms for clusters

ref

Reference-distribution DiffSOM object

rdist

Scatter distribution generator

pch, cex, alpha

Used for plotting as usual

Examples

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PlotExprs(ds2, ref=ds, clusters=T)

exaexa/DiffSOM documentation built on Aug. 22, 2019, 2:46 p.m.