Man pages for eyalbenda/bulkPop
Simulate a propogating population with a set of genetic variants
| crossIndividuals | Cross two indiviiduals Workhorse function to cross two... |
| expandGenomeToVariantlist | The function extends a genome to more variants, by imputing... |
| findProxyForPosition | Find closest marker to a position |
| getGenotypes | Get the genotype of the individual at a variant or position... |
| getIndividualMatingProbabilities | Return a relative measure of mating probability for a list of... |
| getMatingSubpopulation | Use the fitness loci to choose the submating population out... |
| is.genome | Test if a genome |
| is.individual | Test if x is in an individual object |
| medeaSelection | Medea selection A sleection based on the sup-35/pha-1 selfish... |
| N2xCB4856.genome | A genome object for N2 and CB4856 |
| newGenome | Create a new genome object - object including all markers and... |
| newIndividual | Generate a new individual Flexible function to generate an... |
| parseAllGenotypes | Function to parse genotype table from a population of... |
| performMating | Mate a population of males to a population of females. |
| plotGenotypeAndMarkerList | Plot a list of genotypes and markers An extension of... |
| plotGenotypeAndMarkerTable | Plot genotype and marker table |
| recombineIndividual | Simulate a meiotic recombination in an individual Workhorse... |
| recombProbFromGeneticDistance | Convert genetic distance to probability of recombination |
| selfHermaphrodite | Perform a selfing Hasn't been thoroughly tested, basically... |
| zeelPeelSelection | Zeel peel selection A sleection based on the peel-1/zeel-1... |
