getMatingSubpopulation: Use the fitness loci to choose the submating population out...

In eyalbenda/bulkPop: Simulate a propogating population with a set of genetic variants

Description

Use the fitness loci to choose the submating population out of the pool of males or females.

Usage

getMatingSubpopulation(genome, pop, matingFrac, fitnessLoci = NULL,
  sex = c("male", "female"))

Arguments

genome	A genome object generated with the package
pop	A list of individuals of males and females to pick from
matingFrac	the fraction of the relevant sex population which will be chosen. between 0 and 1 (1 is no selection)
fitnessLoci	A data frame with the following columns: chrom: chromosome marker: name of the marker to use (see findProxyForPosition for easy way to get marker for locus of interest) direction: (0,1) which allele confers an advantage? effect: the effect size of the locus. How much advantage does it confer?
sex	choose a population of males or females?

eyalbenda/bulkPop documentation built on May 17, 2019, 11:14 p.m.