TreeSummarizedExperiment-combine: Combine TSEs by rows or columns

In fionarhuang/TreeSummarizedExperiment: TreeSummarizedExperiment: a S4 Class for Data with Tree Structures

Combine TSEs by rows or columns

Description

rbind and cbind take one or more TreeSummarizedExperiment objects and combine them by columns or rows, respectively.

Usage

## S4 method for signature 'TreeSummarizedExperiment'
rbind(..., deparse.level = 1)

## S4 method for signature 'TreeSummarizedExperiment'
cbind(..., deparse.level = 1)

Arguments

...	One or more TreeSummarizedExperiment objects.
deparse.level	See cbind

Value

A TreeSummarizedExperiment object

Author(s)

Ruizhu Huang

Examples

# rbind works : 
# a) TSE without rowTree and without colTree
# b) TSE with rowTree but without colTree
# c) TSE without rowTree but with colTree
# d) TSE with rowTree & colTree

set.seed(1)
# a) 
(tse_a <- makeTSE(include.colTree = FALSE))
(tse_b <- makeTSE(include.colTree = FALSE))

# b) 
(tse_c <- makeTSE(include.rowTree = FALSE))
(tse_d <- makeTSE(include.rowTree = FALSE))

rbind(tse_a, tse_b)
cbind(tse_c, tse_d)

fionarhuang/TreeSummarizedExperiment documentation built on June 11, 2025, 9:42 a.m.