Files in fl-yu/SCAVENGE
Identifying genetic trait/phenotype relevant cell type/state at single cell resolution
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
Meta/vignette.rds
NAMESPACE
R/SCAVENGE_color.R
R/cal_scalefactor.R
R/capOutlierQuantile.R
R/do_lsi.R
R/get_sigcell_simple.R
R/getmutualknn.R
R/max_min_scale.R
R/randomWalk_sparse.R
R/seedindx.R
R/tfidf.R
README.md
SCAVENGE.Rproj
doc/SCAVENGE-vignette.R
doc/SCAVENGE-vignette.Rmd
doc/SCAVENGE-vignette.html
doc/SCAVENGE-vignette.pdf
docs/.DS_Store
docs/404.html
docs/SCAVENGE-vignette.pdf
docs/articles/.DS_Store
docs/articles/SCAVENGE-vignette_files/.DS_Store
docs/articles/SCAVENGE-vignette_files/figure-html/fig0-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig1-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig2-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig3-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig4-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig5-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig6-1.png
docs/articles/SCAVENGE-vignette_files/figure-html/fig7-1.png
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/cal_scalefactor.html
docs/reference/capOutlierQuantile.html
docs/reference/do_lsi.html
docs/reference/get_sigcell_simple.html
docs/reference/getmutualknn.html
docs/reference/index.html
docs/reference/max_min_scale.html
docs/reference/randomWalk_sparse.html
docs/reference/seedindex.html
docs/reference/tfidf.html
image/schematic-view_1.png
inst/.DS_Store
inst/extdata/mono.PP001.bed
inst/rda/pbmc5k_SE.rda
man/.DS_Store
man/cal_scalefactor.Rd
man/capOutlierQuantile.Rd
man/do_lsi.Rd
man/get_sigcell_simple.Rd
man/getmutualknn.Rd
man/max_min_scale.Rd
man/randomWalk_sparse.Rd
man/seedindex.Rd
man/tfidf.Rd
vignettes/.DS_Store
vignettes/.gitignore
vignettes/SCAVENGE-vignette.Rmd
