getData-methods: get the data slot from the methylKit objects
In fortunatobianconi/methylkit: DNA methylation analysis from high-throughput bisulfite sequencing results
Description
Usage
Arguments
Value
Examples
Description
The functions retrieves the table containing methylation
information from methylKit Objects. The data
retrived from this function is of a
data.frame. This is basically containing
all relevant methylation information per genomic region
or base.
Usage
1
getData(x)
Arguments
x
an
methylBase,methylRaw or
methylDiff object
Value
data frame for methylation events
Examples
1
2
3
4
5
6
7
8
9
10
data(methylKit)
# following commands show first lines of returned data.frames from getData() function
head(
getData(methylBase.obj)
)
head( getData(methylDiff.obj))
head(getData(methylRawList.obj[[1]]))
fortunatobianconi/methylkit documentation built on May 16, 2019, 1:51 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
The functions retrieves the table containing methylation
information from methylKit Objects. The data
retrived from this function is of a
data.frame. This is basically containing
all relevant methylation information per genomic region
or base.
Usage
1 | getData(x)
|
Arguments
x |
an
|
Value
data frame for methylation events
Examples
1 2 3 4 5 6 7 8 9 10 | data(methylKit)
# following commands show first lines of returned data.frames from getData() function
head(
getData(methylBase.obj)
)
head( getData(methylDiff.obj))
head(getData(methylRawList.obj[[1]]))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.