setExtension: Set or register an RCX extension

In frankkramer-lab/RCX: R package implementing the Cytoscape Exchange (CX) format

Set or register an RCX extension

Description

To simplify the usage of extension of the RCX data model new extensions can easily registered on load with this function. Registered extension then automatically are used for the conversion of CX data containing aspects of these extensions. The accession names and classes then are also added to getAspectClasses.

Usage

setExtension(package, accession, className)

Arguments

package	character; name of the extension package
accession	character; accession name used in RCX (e.g. rcx$accessionName)
className	character; class name of the aspect (e.g. is(rcx$accessionName, "AccessionNameAspect"))

Value

options()$RCX.options$extensions

See Also

aspectClasses

Examples

## Not run: 
setExtension("RCXMyRcxExtension", "myRcxExtension", "MyRcxExtensionAspect")

## End(Not run)

frankkramer-lab/RCX documentation built on Feb. 4, 2023, 5:12 p.m.