mapkey: Make new 'mapkey' rescaling function.
In gact/shmootl: QTL Analysis Utilities for Yeast
Description
Usage
Arguments
Value
References
See Also
Description
This function takes as input one or more maps - one of each supported
map type - and returns a function that can be used to rescale a locus
mapframe of map positions. The input maps must be comparable,
having the same set of markers on the same chromosomes, although the
marker names may be different. As in R/qtl, map positions are
interpolated if they are within the bounds of the component maps, and
extrapolated otherwise.
Usage
1
Arguments
...
One or more component maps, all with comparable marker loci.
Value
A mapkey function similar to the R/qtl function
interpPositions, taking a locus mapframe and map unit
parameter, and returning a mapframe that has been rescaled in
terms of the given map unit.
References
Broman KW, Wu H, Sen S, Churchill GA (2003) R/qtl: QTL mapping
in experimental crosses. Bioinformatics 19:889-890.
(PubMed)
See Also
Other mapkey functions: mapkeyOpt
gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.
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Description Usage Arguments Value References See Also
Description
This function takes as input one or more maps - one of each supported
map type - and returns a function that can be used to rescale a locus
mapframe of map positions. The input maps must be comparable,
having the same set of markers on the same chromosomes, although the
marker names may be different. As in R/qtl, map positions are
interpolated if they are within the bounds of the component maps, and
extrapolated otherwise.
Usage
1 |
Arguments
... |
One or more component maps, all with comparable marker loci. |
Value
A mapkey function similar to the R/qtl function
interpPositions, taking a locus mapframe and map unit
parameter, and returning a mapframe that has been rescaled in
terms of the given map unit.
References
Broman KW, Wu H, Sen S, Churchill GA (2003) R/qtl: QTL mapping in experimental crosses. Bioinformatics 19:889-890. (PubMed)
See Also
Other mapkey functions: mapkeyOpt
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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