parsePseudomarkerIDs: Parse pseudomarker IDs.
In gact/shmootl: QTL Analysis Utilities for Yeast

Description Usage Arguments Value Pseudomarker IDs

This function parses an input vector of pseudomarker IDs, and returns a genetic mapframe with the locus in each row derived from the corresponding pseudomarker ID in the input vector. An error is raised if any of the input values cannot be parsed as a pseudomarker ID.

1	parsePseudomarkerIDs(loc.ids)

loc.ids

Vector of pseudomarker IDs.

Genetic mapframe with loci corresponding to the input pseudomarker IDs.

Pseudomarker IDs are used by R/qtl for inter-marker loci. They indicate the reference sequence and genetic map position of the locus (e.g. 'c04.loc33' for a locus at position 33cM on chromosome IV).

gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.