readDatasetHDF5: Read HDF5 dataset. The named HDF5 dataset is read from the...

Description Usage Arguments Value Author(s)

View source: R/hdf5.R

Description

Read HDF5 dataset.

The named HDF5 dataset is read from the specified HDF5 file using the method for the dataset type, as determined from the 'R.class' or 'class' attribute of the HDF5 object.

Usage

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readDatasetHDF5(infile, h5name, ...)

readDatasetHDF5.array(infile, h5name, ...)

readDatasetHDF5.cross(infile, h5name, ...)

readDatasetHDF5.data.frame(infile, h5name, rownames.column = "rownames", ...)

readDatasetHDF5.default(infile, h5name, ...)

readDatasetHDF5.list(infile, h5name, ...)

readDatasetHDF5.map(infile, h5name, ...)

readDatasetHDF5.mapframe(infile, h5name, ...)

readDatasetHDF5.matrix(infile, h5name, ...)

readDatasetHDF5.qtlintervals(infile, h5name, ...)

readDatasetHDF5.scanone(infile, h5name, ...)

readDatasetHDF5.scanonebins(infile, h5name, ...)

readDatasetHDF5.scanoneperm(infile, h5name, ...)

readDatasetHDF5.scantwo(infile, h5name, ...)

readDatasetHDF5.scantwoperm(infile, h5name, ...)

## S3 method for class 'summary.scanonebins'
readDatasetHDF5(infile, h5name, ...)

## S3 method for class 'summary.scanoneperm'
readDatasetHDF5(infile, h5name, ...)

## S3 method for class 'summary.scantwo'
readDatasetHDF5(infile, h5name, ...)

readDatasetHDF5.summary.scantwoperm(infile, h5name, ...)

Arguments

infile

An input HDF5 file.

h5name

HDF5 dataset name.

...

Further arguments (see below).

rownames.column

For a data.frame, if any column has a name that matches this parameter, that column is extracted from the data.frame and the rownames are set from its contents.

Value

R object corresponding to the named HDF5 object.

Author(s)

Thomas Walsh <tw164@protonmail.com>

Yue Hu


gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.