writeDatasetHDF5: Write R object to an output HDF5 dataset.

Description Usage Arguments Author(s)

View source: R/hdf5.R

Description

The given R object is written to the named HDF5 dataset using the method for the given dataset type, as determined by the class of the R object.

Usage

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writeDatasetHDF5(dataset, outfile, h5name, overwrite = FALSE, ...)

## S3 method for class 'array'
writeDatasetHDF5(dataset, outfile, h5name, overwrite = FALSE,
  ...)

## S3 method for class 'cross'
writeDatasetHDF5(dataset, outfile, h5name, overwrite = FALSE,
  ...)

## S3 method for class 'data.frame'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, rownames.column = "rownames", ...)

## Default S3 method:
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'list'
writeDatasetHDF5(dataset, outfile, h5name, overwrite = FALSE,
  ...)

## S3 method for class 'map'
writeDatasetHDF5(dataset, outfile, h5name, overwrite = FALSE,
  ...)

## S3 method for class 'mapframe'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'matrix'
writeDatasetHDF5(dataset, outfile, h5name, overwrite = FALSE,
  ...)

## S3 method for class 'qtlintervals'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'scanone'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'scanonebins'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'scanoneperm'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'scantwo'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'scantwoperm'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'summary.scanonebins'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'summary.scanoneperm'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'summary.scantwo'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

## S3 method for class 'summary.scantwoperm'
writeDatasetHDF5(dataset, outfile, h5name,
  overwrite = FALSE, ...)

Arguments

dataset

R object.

outfile

An output HDF5 file.

h5name

HDF5 dataset name.

overwrite

Option indicating whether to force overwrite of an existing dataset. By default, existing datasets cannot be overwritten.

...

Further arguments (see below).

rownames.column

For a data.frame or equivalent object, any rownames are removed, and then inserted into a column of the main table, with its column name taken from this parameter.

Author(s)

Thomas Walsh <tw164@protonmail.com>

Yue Hu


gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.