ampliPanel: An amplicon panel example for use the TarSeqQC R package.

Description Format Details Author(s) Source See Also

Description

A non-real dataset containing amplicon sequencing results to test the TarSeqQC package.

Format

A TargetExperiment object

Details

bedFile

Bed file containing 29 amplicons and 8 genes.

feature

Character "amplicon" indicating that the analyzed features are amplicon sequences

attribute

Character "coverage"

Author(s)

Gabriela A. Merino gmerino@bdmg.com.ar, Cristobal Fresno cfresno@bdmg.com.ar, Yanina Murua ymurua@leloir.org.ar, Andrea S. Llera allera@leloir.org.ar and Elmer A. Fernandez efernandez@bdmg.com.ar

Source

see TargetExperiment-class

See Also

Other TargetExperiment: TargetExperiment-class, TargetExperiment, ampliPanel2, initialize, myCounts


gamerino/TarSeqQC documentation built on Feb. 3, 2020, 9:19 p.m.