PlotStarsMSTCondRm: Modified PlotStarsMST function of FlowSOM, with removal of...
In gautierstoll/CytoSOM: Easy use of FlowSOM
View source: R/PlotStarsMSTCondRm.R
Description
Modified PlotStarsMST function of FlowSOM, with removal of smallest clusters, over a subset of data
Usage
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PlotStarsMSTCondRm(
fSOMObject,
metaClustFactors,
condIndex,
mainTitle,
nbRm = 0,
smallTree = F,
equalSize = F
)
Arguments
fSOMObject
FlowSOM tree
metaClustFactors
meta-clusters (numbers or names)
condIndex
index of data events
mainTitle
title
nbRm
number of smallest cluster to remove
smallTree
true if tree is small and meta-cluster legend is big
equalSize
true if clusters are represented with identical sizes
gautierstoll/CytoSOM documentation built on May 16, 2020, 10:36 a.m.
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View source: R/PlotStarsMSTCondRm.R
Description
Modified PlotStarsMST function of FlowSOM, with removal of smallest clusters, over a subset of data
Usage
1 2 3 4 5 6 7 8 9 | PlotStarsMSTCondRm(
fSOMObject,
metaClustFactors,
condIndex,
mainTitle,
nbRm = 0,
smallTree = F,
equalSize = F
)
|
Arguments
fSOMObject |
FlowSOM tree |
metaClustFactors |
meta-clusters (numbers or names) |
condIndex |
index of data events |
mainTitle |
title |
nbRm |
number of smallest cluster to remove |
smallTree |
true if tree is small and meta-cluster legend is big |
equalSize |
true if clusters are represented with identical sizes |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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