plot_sigs: Visualize the output of siglasso as barplots

In gersteinlab/siglasso: Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood

Visualize the output of siglasso as barplots

Description

Show a barplot of the signature fractions in multiple samples

Usage

plot_sigs(sig_weights, plot_colors = NA, re_order = F, sample_order)

Arguments

sig_weights	A matrix of weigths of signatures in multiple samples
plot_colors	Colors for plotting, if NA, it generate its own colors
re_order	Should it reorder the samples, default is False and always reorder if sample_order is provided
sample_order	A vector of how samples should be ordered. If not supplied, it will order by the sum of weights

gersteinlab/siglasso documentation built on Sept. 5, 2022, 8:45 p.m.