View source: R/TCGA_Download_Preprocess.R
TCGA_EstimateMissingValues_MolecularData | R Documentation |
Internal.Deletes samples and genes with more NAs than the respective thresholds. Imputes other NAs values.
TCGA_EstimateMissingValues_MolecularData(
MET_Data,
MissingValueThresholdGene = 0.3,
MissingValueThresholdSample = 0.1
)
MET_Data |
matrix of gene expression data |
MissingValueThresholdGene |
threshold for missing values per gene. Genes with a percentage of NAs greater than this threshold are removed. Default is 0.3. |
MissingValueThresholdSample |
threshold for missing values per sample. Samples with a percentage of NAs greater than this threshold are removed. Default is 0.1. |
gene expression data with no missing values.
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