TCGA_GENERIC_CheckBatchEffect: The TCGA_GENERIC_CheckBatchEffect function
In gevaertlab/EpiMix: EpiMix: an integrative tool for the population-level analysis of DNA methylation
View source: R/TCGA_Download_Preprocess.R
TCGA_GENERIC_CheckBatchEffect R Documentation
The TCGA_GENERIC_CheckBatchEffect function
Description
Internal. Checks if batch correction is needed.
Usage
TCGA_GENERIC_CheckBatchEffect(GEN_Data, BatchData)
Arguments
GEN_Data
matrix with data to be corrected for batch effects.
BatchData
Batch data.
Value
the p value from ANOVA test on PCA values.
gevaertlab/EpiMix documentation built on July 20, 2023, 9:28 a.m.
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View source: R/TCGA_Download_Preprocess.R
| TCGA_GENERIC_CheckBatchEffect | R Documentation |
The TCGA_GENERIC_CheckBatchEffect function
Description
Internal. Checks if batch correction is needed.
Usage
TCGA_GENERIC_CheckBatchEffect(GEN_Data, BatchData)
Arguments
GEN_Data |
matrix with data to be corrected for batch effects. |
BatchData |
Batch data. |
Value
the p value from ANOVA test on PCA values.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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