Description Usage Arguments Value Author(s) See Also
Manually add identifications to a pepmatched object. This can both be used as an extension to mass match, or without mass matching.
1 | add_id(pepmatched, ID_vector, name_vector, pepseq_vector, pepmass_vector)
|
pepmatched |
Input object of class |
ID_vector |
A character vector with the IDs of the features that get the identifications. This is the value of the first column of the "matchlist". See vignette for an example. Can also be a single character string. |
name_vector |
A character vector with the same length as the ID_vector, containing the names of the peptides. |
pepseq_vector |
Optional character vector with the peptide sequences of the identifications to be added. |
pepmass_vector |
Optional numeric vector with the precise masses of the identifications to be added. |
An object of class pepmatched
with added identifications that can serve as input to downstream labelpepmatch functions.
Rik Verdonck
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