lpm_volcanoplot: Plot a volcano plot.
In goat-anti-rabbit/labelpepmatch.R: Tools For Interpreting Mass Spectra With Labeled Peptides
Description
Usage
Arguments
Author(s)
View source: R/lpm_volcanoplot.R
Description
Make a volcanoplot from an lpm_linearmodel object. Here, every feature is plotted in the log2(fold change) * -log10(p-value) space. It is a very convenient way of visualizing multiple tests in one plot.
Usage
1
lpm_volcanoplot(x, adjusted = T, plotlocator = F)
Arguments
x
An object of class lpm_linearmodel
adjusted
Logical. If TRUE, adjusted p-values are used. If FALSE, raw p-values are used.
plotlocator
Logical. If TRUE, you can click on the plot and the identity of the nearest feature will be printed into the R-session. Click under the plot to return to your normal R-session.
Author(s)
Rik Verdonck
goat-anti-rabbit/labelpepmatch.R documentation built on May 17, 2019, 7:29 a.m.
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Description Usage Arguments Author(s)
View source: R/lpm_volcanoplot.R
Description
Make a volcanoplot from an lpm_linearmodel object. Here, every feature is plotted in the log2(fold change) * -log10(p-value) space. It is a very convenient way of visualizing multiple tests in one plot.
Usage
1 | lpm_volcanoplot(x, adjusted = T, plotlocator = F)
|
Arguments
x |
An object of class |
adjusted |
Logical. If TRUE, adjusted p-values are used. If FALSE, raw p-values are used. |
plotlocator |
Logical. If TRUE, you can click on the plot and the identity of the nearest feature will be printed into the R-session. Click under the plot to return to your normal R-session. |
Author(s)
Rik Verdonck
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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