estimate_lim: estimate_lim
In gogleva/SecretSanta: flexible pipelines for secretome prediction
Description
Usage
Arguments
Value
View source: R/helper_functions.R
Description
helper function to estimate approximate length threshold if
sequence chunk size exceedes 200000 a.a len limit and truncate long sequences
or throw them away, otherwise signalp will break (signalp2 and signalp3 will)
Usage
1
estimate_lim(fasta_chunk, truncate)
Arguments
fasta_chunk
AAStringSet
truncate
truncate or throw away
Value
truncated AAStringSet
gogleva/SecretSanta documentation built on May 30, 2019, 8:02 a.m.
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Description Usage Arguments Value
View source: R/helper_functions.R
Description
helper function to estimate approximate length threshold if sequence chunk size exceedes 200000 a.a len limit and truncate long sequences or throw them away, otherwise signalp will break (signalp2 and signalp3 will)
Usage
1 | estimate_lim(fasta_chunk, truncate)
|
Arguments
fasta_chunk |
AAStringSet |
truncate |
truncate or throw away |
Value
truncated AAStringSet
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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