ask_uniprot: fetch known subcellular location from UniprotKB based on...
In gogleva/SecretSanta: flexible pipelines for secretome prediction
Description
Usage
Arguments
Value
Examples
Description
fetch known subcellular location from UniprotKB based on uniprot ids
Usage
1
ask_uniprot(uniprotID_list)
Arguments
uniprotID_list
a list of uniprot IDs
Value
a list of locations
Examples
1
2
3
4
5
id_list <- c('P39864', 'D0N4E2', 'Q5BUB4', 'D0N381', 'B1NNT7', 'D0NP26')
res <- ask_uniprot(id_list)
#try submitting a list containing some non-existing UniprotIDs:
bad_list <- c('P39864', 'D0N4E2', 'Q5BUB4', 'D0N381', 'B1NNT7', 'D0NP2688', 'D0N4E2222')
res2 <- ask_uniprot(bad_list)
gogleva/SecretSanta documentation built on May 30, 2019, 8:02 a.m.
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Description Usage Arguments Value Examples
Description
fetch known subcellular location from UniprotKB based on uniprot ids
Usage
1 | ask_uniprot(uniprotID_list)
|
Arguments
uniprotID_list |
a list of uniprot IDs |
Value
a list of locations
Examples
1 2 3 4 5 | id_list <- c('P39864', 'D0N4E2', 'Q5BUB4', 'D0N381', 'B1NNT7', 'D0NP26')
res <- ask_uniprot(id_list)
#try submitting a list containing some non-existing UniprotIDs:
bad_list <- c('P39864', 'D0N4E2', 'Q5BUB4', 'D0N381', 'B1NNT7', 'D0NP2688', 'D0N4E2222')
res2 <- ask_uniprot(bad_list)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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