Man pages for goodarzilab/Ribolog
Logistic-regression-based analysis of ribosome profiling data
| add_sd_z | add_sd_z |
| adj_TER_p | adj_TER_p |
| bam2count | bam2count |
| bamtolist_rW | bamtolist_rW |
| CELP_bias | CELP_bias |
| CELP_detect_bias | CELP_detect_bias |
| codon2transcript | codon2transcript |
| comb_cor_p | com_cor_p |
| create_te | create_te |
| frame_psite_length_rW | frame_psite_length_rW |
| frame_psite_rW | frame_psite_rW |
| generate_correlogram | generate_correlogram |
| generate_ENZ | generate_ENZ |
| gm_mean | gm_means |
| gm_mean_z | gm_means_z |
| logit_seq | logit_seq |
| metaprofile_psite_rW | metaprofile_psite_rW |
| meta_test | meta_test |
| min_count_filter | min_count_filter |
| normalize_median_of_ratios | normalize_median_of_ratios |
| normalize_median_of_ratios_append | normalize_median_of_ratios_append |
| pairs2correlograms | pairs2correlograms |
| pairs2pi0s | pairs2pi0s |
| partition_to_uniques | partition_to_uniques |
| pca_qc | pca_qc |
| plot_mirrors_CELP | plot_mirrors_CELP |
| print_period_region | print_period_region |
| print_period_region_length | print_period_region_length |
| print_read_end_heatmap | print_read_end_heatmap |
| print_read_ldist | print_read_ldist |
| print_rop | print_rop |
| psite_info_rW | psite_info_rW |
| psite_rW | psite_rW |
| psite_to_codon_count | psite_to_codon_count |
| read_annotation | read_annotation |
| rends_heat_rW | rends_heat_rW |
| rlength_distr_rW | rlength_distr_rW |
| row_center | row_center |
| row_standardize | row_standardize |
| TER_all_pairs | TER_all_pairs |
| test_ENZ | test_ENZ |
| visualize_CELP | visualize_CELP |
