HLARanges: Constructor for HLARanges objects

In gschofl/hlatools: A collection of tools to work with IPD-IMGT/HLA data

Description

Constructor for HLARanges objects

Usage

HLARanges(
  seqnames = S4Vectors::Rle(),
  ranges = IRanges::IRanges(),
  id = NA_character_,
  order = NA_integer_,
  type = NA_character_,
  status = NA_character_,
  frame = NA_integer_,
  ...
)

Arguments

seqnames	character vector of the sequence name.
ranges	IRanges object containing the ranges.
id	character vector of feature IDs.
order	integer vector of feature order.
type	character vector of feature type.
status	character vector of completeness status
frame	integer vector of reading order.
...	Arguments passed to GenomicRanges::GRanges().

Value

A HLARanges object.

See Also

parse_hla_alleles(), HLAAllele

Examples

showClass("HLARanges")

gschofl/hlatools documentation built on July 2, 2021, 10:59 a.m.