Description Usage Arguments Value
Extract the distance to each nearest neighbor for specified cell-types, normalized by downsampling each cell-type to the same size, for a single sample, with no resampling
1 2 3 4 5 6 | normal_nearest_neighbor_sample_once(sample_name, data, markers,
minimum_cells = 50, grouped_sample = TRUE)
## S4 method for signature 'character,ImageSet'
normal_nearest_neighbor_sample_once(sample_name,
data, markers, minimum_cells = 50, grouped_sample = TRUE)
|
sample_name |
sample_name sample name string |
data |
IrisSpatialFeatures ImageSet object |
markers |
vector of marker names to use |
minimum_cells |
the smallest number of cells (default:50) |
grouped_sample |
TRUE/FALSE if we want to group samples together and thus normalize the frames to the smallest frame count (Default: TRUE) |
data.frame
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.