annotateProteinTraces: Annotate protein traces with the complex id and complex name...

Description Usage Arguments Examples

View source: R/dataConversion.R

Description

Annotate protein traces with the complex id and complex name to which they might belong.

Usage

1
annotateProteinTraces(protein.traces, complex.assoc)

Arguments

protein.traces

A long list data.table of protein traces that has the columns

  • protein_id : character

  • sec : numeric

  • intensity : numeric

complex.assoc

A datatable holding the protein <-> complex associations. It has the format: columns

  • complex_id : character

  • complex_name : character

  • protein_id : character

Examples

1
2
prottraces <- produceProteinTraces(peptraces)
prottraces.wc <- annotateProteinTraces(prottraces, corum.complex.protein.assoc)

hafenr/MACode documentation built on May 17, 2019, 2:24 p.m.