convertToPeptideCCData: Convert a peptide trace matrix as is input to cprophet to the...
In hafenr/MACode: Functions and code snippets for my master thesis
View source: R/dataConversion.R
Description
Convert a peptide trace matrix as is input to cprophet to the same matrix
that associates peptides to complexes, rather than to proteins.
The result of this transformation can then be used as the input for a CC
workflow that tries to create complex features directly from peptides.
Usage
1
convertToPeptideCCData(pc.input)
Arguments
pc.input
The data.table that is normally input to cprophet. It has
columns:
peptide_id
protein_id
The remaining columns run across the SEC dimension.
hafenr/MACode documentation built on May 17, 2019, 2:24 p.m.
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View source: R/dataConversion.R
Description
Convert a peptide trace matrix as is input to cprophet to the same matrix that associates peptides to complexes, rather than to proteins. The result of this transformation can then be used as the input for a CC workflow that tries to create complex features directly from peptides.
Usage
1 | convertToPeptideCCData(pc.input)
|
Arguments
pc.input |
The data.table that is normally input to cprophet. It has columns:
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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