imputePartialPeakgroupCompletness: Estimate the completness of a peak group that was annotated...

Description Usage Arguments Examples

View source: R/imputePartialPeakgroupCompleteness.R

Description

Estimate the completness of a peak group that was annotated as being partially complete.

Usage

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imputePartialPeakgroupCompletness(manual.annotations.partial, protein.traces,
  window.size = 14, corr.cutoff = 0.7)

Arguments

manual.annotations.partial

A manual annotation data.table

protein.traces

Wide format protein traces with columns:

  • complex_id

  • protein_id

  • complex_name

  • additional columns for each sec rt

window.size

The window in SEC that is considered around each manually annotated RT.

corr.cutoff

Above which value a group of traces is considered to be well correlated.

Examples

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hafenr/MACode documentation built on May 17, 2019, 2:24 p.m.