API for haneylab/geNet
Generating large network of co-occurring genes
| Global functions | |
|---|---|
| check_input_geNet | Man page Source code |
| check_input_visualization | Man page Source code |
| contract_network | Man page Source code |
| export_geNet_result | Man page Source code |
| filter_id | Man page Source code |
| final_score | Man page Source code |
| geNet | Man page Source code |
| gen_network_obj | Man page Source code |
| gen_visnetwork_data | Man page Source code |
| generate_df_scores | Man page Source code |
| generate_final_df | Man page Source code |
| generate_freqs_genes | Man page Source code |
| get_colors_based_on_gene_ID | Man page Source code |
| get_colors_based_on_size | Man page Source code |
| get_colors_based_on_strains | Man page Source code |
| get_gene_ID_based_on_tooltip | Man page Source code |
| get_group_names_based_on_n_nodes | Man page Source code |
| get_group_names_based_on_tooltip | Man page Source code |
| get_groups_based_on_annotation | Man page Source code |
| get_groups_based_on_clustering | Man page Source code |
| get_groups_based_on_gene_ID | Man page Source code |
| get_legend_df | Man page Source code |
| get_mappings | Man page Source code |
| get_new_colors_based_on_groups | Man page Source code |
| mod_color_layer | Man page Source code |
| mod_group_layer | Man page Source code |
| mod_group_names | Man page Source code |
| mod_size_layer | Man page Source code |
| mod_tooltip_visnetwork | Man page Source code |
| plot_visnetwork | Man page Source code |
| visualize_network | Man page Source code |
