get_gene_ID_based_on_tooltip: get_gene_ID_based_on_tooltip

In haneylab/geNet: Generating large network of co-occurring genes

Description

function to get the gene IDs based on the annotation (tooltip column)

Usage

get_gene_ID_based_on_tooltip(data, vec_tooltip)

Arguments

data	List of two ffdf objects (format generated by the geNet() function )
vec_tooltip	vector of annotation to match with the gene IDs. Mandatory argument.

Value

Object of class "dataframe", which reports the genes ID for the specified annotation keywords.

Examples

## Not run: get_gene_ID_based_on_tooltip(data,vec_tooltip=c("protein","secretion"))
# Get the nodes IDs whose annotation reports the word "protein" and "secretion"

## End(Not run)

haneylab/geNet documentation built on Oct. 4, 2020, 8:40 a.m.