gene.rank.calculation.vector: Calculation of gene ranks using a vector of mean expression...

In heiniglab/scPower: Experimental design framework for scRNAseq population studies (eQTL and DE)

Calculation of gene ranks using a vector of mean expression per gene

Description

Calculation of gene ranks using a vector of mean expression per gene

Usage

gene.rank.calculation.vector(meanVector, geneNames, diff.expr.genes)

Arguments

meanVector	Vector with mean value per gene in the sample (use normalized counts)
geneNames	Gene name corresponding to the mean value (need to be in the same order as the mean vector)
diff.expr.genes	Vector of significant genes (DE or eQTLs), the gene names in the vector need to match the row names of the count matrix

Value

Data frame with expression rank for each DE gene

heiniglab/scPower documentation built on Jan. 9, 2025, 12:13 p.m.