getRates: Get Optimized Rates

Description Usage Arguments Value Author(s) Examples

View source: R/getRates.R

Description

getRates takes the model file as the argument and based on the description of the model file generates flux values for "minimum" or "maximum" reaction rates

Usage

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getRates(modelFile)

Arguments

modelFile

The path to a LIM model file as generated for instance from the functions createLIMFromBiGG or createLIMFromSBML

Value

The value returned is one dimentional numeric vector of flux rates for each reaction

Author(s)

Anand K. Gavai <anand.gavai@bioinformatics.nl>

Examples

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data("Glycolysis")
rates <-getRates(Glycolysis)
rates

hettling/BiGGR documentation built on April 17, 2020, 5:19 a.m.