Files in hettling/BiGGR
Constraint based modeling in R using metabolic reconstruction databases

.BBSoptions
BiGGR.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/BiGGR-internal.R R/buildSBMLFromBiGG.R R/buildSBMLFromGenes.R R/buildSBMLFromPathways.R R/buildSBMLFromReactionIDs.R R/createLIMFromBiGG.R R/createLIMFromSBML.R R/extractGeneAssociations.R R/extractPathways.R R/getPathwaysForSBML.R R/getRates.R R/gprMapping.R R/gprMappingAvg.R R/rmvSpliceVariant.R R/sampleFluxEnsemble.R R/sbml2hyperdraw.R
build/vignette.rds
data/E.coli_iAF1260.rda
data/E.coli_iJR904.rda
data/E.coli_textbook.rda
data/Glycolysis.rda
data/H.pylori_ilT341.rda
data/H.sapiens_Recon_1.rda
data/M.barkeri_iAF692.rda
data/M.tuberculosis_iNJ661.rda
data/P.putida_iJN746.rda
data/Recon2.rda
data/S.aureus_iSB619.rda
data/S.cerevisiae_iND750.rda
data/datalist
data/lying.tunell.data.rda
inst/CITATION
inst/COPYRIGHTS
inst/NEWS.Rd
inst/doc/BiGGR.R
inst/doc/BiGGR.Rnw
inst/doc/BiGGR.pdf
inst/extdata/Gene_Symbol_Entrez_Foldchanges.csv
inst/extdata/Glycolysis.LIM
inst/extdata/Glycolysis_TCA.LIM
inst/extdata/Glycolysis_TCA_recon1_reactionIDs.txt
inst/extdata/Glycolysis_TCA_recon2_reactionIDs.txt
inst/extdata/Reactions.txt
inst/extdata/brainmodel_reactions.txt
man/BiGGR-internal.Rd man/BiGGR-package.Rd man/E.coli_iAF1260.Rd man/E.coli_iJR904.Rd man/E.coli_textbook.Rd man/Glycolysis.Rd man/H.pylori_ilT341.Rd man/H.sapiens_Recon1.Rd man/M.barkeri_iAF692.Rd man/M.tuberculosis_iNJ661.Rd man/P.putida_iJN746.Rd man/Recon2.Rd man/S.aureus_iSB619.Rd man/S.cerevisiae_iND750.Rd man/buildSBMLFromBiGG.Rd man/buildSBMLFromGenes.Rd man/buildSBMLFromPathways.Rd man/buildSBMLFromReactionIDs.Rd man/createLIMFromBiGG.Rd man/createLIMFromSBML.Rd man/extractGeneAssociations.Rd man/extractPathways.Rd man/getPathwaysForSBML.Rd man/getRates.Rd man/gprMapping.Rd man/gprMappingAvg.Rd man/lying.tunell.data.Rd man/rmvSpliceVariant.Rd man/sampleFluxEnsemble.Rd man/sbml2hyperdraw.Rd
vignettes/BiGGR.Rnw
vignettes/BiGGR.bib
hettling/BiGGR documentation built on April 12, 2019, 3:09 p.m.