getAnchors: Get Ordered Retention Time Pairs
In hhabra/Combiner: Method for Combining LC-MS Metabolomics Feature Measurements
getAnchors R Documentation
Get Ordered Retention Time Pairs
Description
Returns the data frame of feature alignments used to anchor the
retention time projection model, constructed by selectAnchors.
Usage
getAnchors(object)
## S4 method for signature 'metabCombiner'
getAnchors(object)
Arguments
object
metabCombiner object
Value
Data frame of anchor features
See Also
selectAnchors
Examples
data(plasma30)
data(plasma20)
p30 <- metabData(plasma30, samples = "CHEAR")
p20 <- metabData(plasma20, samples = "Red")
p.comb <- metabCombiner(p30, p20)
p.comb <- selectAnchors(p.comb, windx = 0.05, windy = 0.03)
anchors <- getAnchors(p.comb)
hhabra/Combiner documentation built on Jan. 26, 2024, 10:30 p.m.
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| getAnchors | R Documentation |
Get Ordered Retention Time Pairs
Description
Returns the data frame of feature alignments used to anchor the
retention time projection model, constructed by selectAnchors.
Usage
getAnchors(object)
## S4 method for signature 'metabCombiner'
getAnchors(object)
Arguments
object |
metabCombiner object |
Value
Data frame of anchor features
See Also
selectAnchors
Examples
data(plasma30)
data(plasma20)
p30 <- metabData(plasma30, samples = "CHEAR")
p20 <- metabData(plasma20, samples = "Red")
p.comb <- metabCombiner(p30, p20)
p.comb <- selectAnchors(p.comb, windx = 0.05, windy = 0.03)
anchors <- getAnchors(p.comb)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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