humayun2017/SPAGI2: SPAGI2: Identification of active signalling pathways for cross-species by integrating gene expression and human protein interaction network

Identify cross species active signalling pathways by utilizing the human signalling pathways. This package contains the neccessary R code to run SPAGI2 as described in "SPAGI2: Identification of active signalling pathways for cross-species by integrating gene expression and human protein interaction network". SPAGI2 is implemented within a helpful framework to identify active signalling pathways for cross-species from a gene expression profile by utilizing the human signalling pathways.

Getting started

Package details

AuthorMd Humayun Kabir
MaintainerThe package maintainer <humayun.mkabir@gmail.com>
LicenseGPL3
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("humayun2017/SPAGI2")
humayun2017/SPAGI2 documentation built on Aug. 5, 2020, 12:06 a.m.