generate_homology_data: generate_homology_data

In humayun2017/SPAGI2: SPAGI2: Identification of active signalling pathways for cross-species by integrating gene expression and human protein interaction network

Description

This function generates homology table and matrix for all ensembl genes of two species.

Usage

generate_homology_data(species1 = "hsapiens", species2)

Arguments

species1	Species 1 name, in the form 'hsapiens'. Default is 'hsapiens'.
species2	Species 2 name, in the form 'hsapiens'

Details

This function generates homology table and matrix for all ensembl genes of two species.

Value

This function returns a list containing the homology table and matrix of the two species.

Examples

human.zebrafish.homology.data<-generate_homology_data(species1 = "hsapiens", species2 = "drerio")
summary(human.zebrafish.homology.data)

humayun2017/SPAGI2 documentation built on Aug. 5, 2020, 12:06 a.m.