API for huqiwen0313/snarePip
snarePip
| Global functions | |
|---|---|
| GetMarkerExprMatrix | Man page |
| GetPagodaWebApp | Source code |
| GetScrubletScores | Source code |
| PlotFragmentHist | Source code |
| PrepareFragmentPlot | Man page Source code |
| RunJD | Man page Source code |
| TSSenrichment | Man page Source code |
| TSSenrichmentPlot | Man page Source code |
| addAtacObj | Man page Source code |
| addMotifMatrix | Man page Source code |
| alignmentStat | Man page Source code |
| assignPeakToGene | Man page Source code |
| calDoubletScore | Man page |
| calJaccard | Man page Source code |
| callMACs | Man page Source code |
| callMACsCluster | Man page Source code |
| cellStatistics | Man page Source code |
| ciceroGeneActivity | Man page Source code |
| clusterComposition | Source code |
| createInputCDS | Man page Source code |
| dimReduct | Man page Source code |
| enrichMotifs | Man page Source code |
| enrichMotifsDAR | Man page Source code |
| fast_multiply | Source code |
| fragmentOverlapPeaks | Man page Source code |
| fragmentOverlapPeaksPlot | Man page Source code |
| getLibID | Source code |
| getTissue | Source code |
| hvgPeaks | Man page Source code |
| idenDAR | Man page Source code |
| intPosMat | Man page Source code |
| merge.sparse | Source code |
| normJD | Man page Source code |
| normPmatrix | Man page Source code |
| p2proc | Source code |
| plotAssoGenes | Man page |
| plotComponentVariancePagoda | Man page Source code |
| plotCompositionBarplots | Source code |
| plotDARoverlap | Man page Source code |
| plotFeature | Man page Source code |
| plotFragmentScatter | Man page Source code |
| plotSaturation | Man page Source code |
| plotSnareBarcodeComparison | Man page Source code |
| plotTopMotifs | Man page Source code |
| posMatrix | Man page Source code |
| quickUmap | Man page Source code |
| read.bam.tags | Man page Source code |
| sampleBackgroundSeq | Man page Source code |
| sampleCell | Man page Source code |
| simulateDoubletMatrix | Man page Source code |
